There are over 40 different genome browsers. Savant is not one of them. Savant was built to handle the next generation of genomics data and can perform realtime analytics, not just visualization.
Note: Savant is no longer officially supported.
Note: These plugins can be downloaded using the Plugin Manager in Savant. To access the Plugin Manager, click Plugins > Plugin Manager.
|1000 Genomes||Load 1000 Genomes alignment tracks|
|Aberrant Splice Modelling||Performs modelling and visualization of splice junctions|
|Chromatogram||Shows sequencing chromatograms atop reference genome|
|edgeR||Detects and visualizes differential enrichment from RNA-seq or ChIP-seq data|
|Data Table||Shows textual data from track records in tabular form|
|Export||Exports screenshots of all bookmarked locations|
|GATK||Predicts and visualizes genotypes from read alignment tracks|
|Gene Ontology||Guides navigation based on ontology terms|
|iReckon||Reconstructs and estimates isoforms from RNA-seq data|
|PING||Guides navigation based on protein-protein interaction databases|
|Remote Commander||Issue navigation and other commands remotely through external tools|
|Ribosome||Shows the amino acid translation of gene tracks|
|SimpleSNP||Predicts and visualizes SNVs from read alignment tracks|
|Snapshot||Exports track images at every bookmarked genomic region|
|SRMA||Realigns HTS read alignments|
|UCSC Explorer||Provides a graphical interface for loading UCSC tracks|
|WikiPathways||Guides navigation based on biological pathways|
Featured Plugin The Aberrant Splice Modelling plugin was developed by Alexander Churbanov from the Beijing Institute of Genomics. It performs modelling and visualization of splice site junctions with a Bayesian splice site sensor. Download this and other great plugins through the built-in Plugin Manager.
Security restrictions on the latest versions of OS X prevent Applications not deployed in the App Store or by Apple Registered developers from being run. For the time being, this includes Savant. To allow Savant to run edit your Security & Privacy Settings to Allow apps downloaded from Anywhere. Then proceed to download Savant via the link below.